Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 AC128676.1-201ENST00000454392 318 ntBASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 AC008040.2-201ENST00000461049 708 ntBASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ATG4AQ8WYN0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ATG4AQ8WYN0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 AC004951.3-201ENST00000418645 1148 ntBASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 C1QBPP2-201ENST00000528754 825 ntBASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 AL353708.3-201ENST00000610272 989 ntBASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ATG4AQ8WYN0 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 AC135776.1-201ENST00000319817 2481 ntBASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 KSR1P1-201ENST00000446298 240 ntBASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 CR392000.1-201ENST00000624770 1228 ntBASIC19.36■□□□□ 0.69
ATG4AQ8WYN0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms