Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 AL589743.5-201ENST00000616611 1050 ntBASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
MBD3L1Q8WWY6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 NKILA-202ENST00000614771 2598 ntBASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 YBX1P10-201ENST00000444752 975 ntBASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
MBD3L1Q8WWY6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 PP12613-201ENST00000424958 2230 ntBASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 SUDS3P1-201ENST00000505831 966 ntBASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
MBD3L1Q8WWY6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms