Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 RN7SL471P-201ENST00000580476 299 ntBASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.75■□□□□ 0.11
RTN4IP1Q8WWV3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.74■□□□□ 0.11
RTN4IP1Q8WWV3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 TSPY20P-201ENST00000450910 630 ntBASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 AC124016.1-201ENST00000609552 612 ntBASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 AC073592.3-201ENST00000625118 1834 ntBASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
RTN4IP1Q8WWV3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 AC020916.1-201ENST00000587762 1774 ntBASIC15.72■□□□□ 0.11
RTN4IP1Q8WWV3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms