Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 AC007322.1-201ENST00000426983 750 ntBASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CKAP2Q8WWK9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 AC092666.2-201ENST00000613287 246 ntBASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 KRT8P45-201ENST00000414328 1447 ntBASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.55■□□□□ 0.56
CKAP2Q8WWK9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 TNRC18P3-201ENST00000441896 2691 ntBASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CKAP2Q8WWK9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CKAP2Q8WWK9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms