Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CT55Q8WUE5 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CT55Q8WUE5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CT55Q8WUE5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CT55Q8WUE5 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CT55Q8WUE5 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CT55Q8WUE5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.4■□□□□ 0.38
CT55Q8WUE5 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CT55Q8WUE5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CT55Q8WUE5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CT55Q8WUE5 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.39■□□□□ 0.38
CT55Q8WUE5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CT55Q8WUE5 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.39■□□□□ 0.38
CT55Q8WUE5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
CT55Q8WUE5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CT55Q8WUE5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.39■□□□□ 0.38
CT55Q8WUE5 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 IFNL4P1-201ENST00000607083 540 ntBASIC17.39■□□□□ 0.37
CT55Q8WUE5 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CT55Q8WUE5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CT55Q8WUE5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 AC090616.6-201ENST00000582640 721 ntBASIC17.38■□□□□ 0.37
CT55Q8WUE5 GPR32P1-201ENST00000601788 811 ntBASIC17.38■□□□□ 0.37
CT55Q8WUE5 AL732292.2-201ENST00000609649 430 ntBASIC17.38■□□□□ 0.37
CT55Q8WUE5 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.38■□□□□ 0.37
CT55Q8WUE5 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CT55Q8WUE5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 AC012615.1-201ENST00000565797 1299 ntBASIC17.37■□□□□ 0.37
CT55Q8WUE5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 IGHV3-41-201ENST00000613121 348 ntBASIC17.37■□□□□ 0.37
CT55Q8WUE5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CT55Q8WUE5 Z98044.1-201ENST00000632503 1764 ntBASIC17.37■□□□□ 0.37
CT55Q8WUE5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CT55Q8WUE5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms