Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SHKBP1Q8TBC3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 AL450487.1-201ENST00000426799 995 ntBASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 AC079602.3-201ENST00000623931 403 ntBASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 AC112497.1-201ENST00000624824 639 ntBASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SHKBP1Q8TBC3 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 AC012313.10-201ENST00000623509 926 ntBASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 AL157888.1-201ENST00000631930 593 ntBASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SHKBP1Q8TBC3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SHKBP1Q8TBC3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SHKBP1Q8TBC3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.58■□□□□ 0.73
SHKBP1Q8TBC3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SHKBP1Q8TBC3 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SHKBP1Q8TBC3 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 AC092119.3-201ENST00000612618 583 ntBASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SHKBP1Q8TBC3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 RCC2P3-201ENST00000418112 1537 ntBASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHKBP1Q8TBC3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms