Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CFAP43Q8NDM7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CFAP43Q8NDM7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC29.19■■■□□ 2.26
CFAP43Q8NDM7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 IGHV3-47-201ENST00000425060 335 ntBASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 ABR-217ENST00000572441 563 ntTSL 4 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 Z69720.1-201ENST00000601483 472 ntBASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 AC010240.3-201ENST00000607688 395 ntBASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 Z83836.1-201ENST00000624605 1642 ntBASIC29.18■■■□□ 2.26
CFAP43Q8NDM7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CFAP43Q8NDM7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 GPR32P1-201ENST00000601788 811 ntBASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
CFAP43Q8NDM7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 AC090616.6-201ENST00000582640 721 ntBASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 AC243591.1-201ENST00000452967 1364 ntBASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 GRAMD4P1-201ENST00000435181 1110 ntBASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 FICD-205ENST00000552758 603 ntTSL 2 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 AL592071.1-201ENST00000611956 408 ntBASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC29.15■■■□□ 2.26
CFAP43Q8NDM7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 AC104390.1-201ENST00000555663 520 ntBASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 AC093484.2-201ENST00000580996 2166 ntBASIC29.14■■■□□ 2.26
CFAP43Q8NDM7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC29.14■■■□□ 2.25
CFAP43Q8NDM7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CFAP43Q8NDM7 BX842568.4-201ENST00000421222 227 ntBASIC29.13■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms