Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD1Q8N668 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD1Q8N668 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD1Q8N668 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD1Q8N668 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.52■□□□□ 0.08
COMMD1Q8N668 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
COMMD1Q8N668 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.52■□□□□ 0.08
COMMD1Q8N668 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD1Q8N668 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.52■□□□□ 0.08
COMMD1Q8N668 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.52■□□□□ 0.08
COMMD1Q8N668 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD1Q8N668 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
COMMD1Q8N668 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.52■□□□□ 0.07
COMMD1Q8N668 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
COMMD1Q8N668 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
COMMD1Q8N668 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
COMMD1Q8N668 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.52■□□□□ 0.07
COMMD1Q8N668 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 AC012618.2-201ENST00000428058 849 ntBASIC15.51■□□□□ 0.07
COMMD1Q8N668 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 RARRES2P10-201ENST00000564312 460 ntBASIC15.51■□□□□ 0.07
COMMD1Q8N668 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 NBPF21P-201ENST00000425093 1451 ntBASIC15.51■□□□□ 0.07
COMMD1Q8N668 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.51■□□□□ 0.07
COMMD1Q8N668 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
COMMD1Q8N668 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 AL353807.1-201ENST00000427475 662 ntBASIC15.5■□□□□ 0.07
COMMD1Q8N668 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 KRT16P5-201ENST00000455284 522 ntBASIC15.5■□□□□ 0.07
COMMD1Q8N668 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
COMMD1Q8N668 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
COMMD1Q8N668 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD1Q8N668 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
COMMD1Q8N668 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
COMMD1Q8N668 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms