Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN4BQ8IWT1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 FAM86EP-206ENST00000510506 987 ntBASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 AC091076.1-201ENST00000610741 619 ntBASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 AC068587.9-201ENST00000641814 219 ntBASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCN4BQ8IWT1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 HCG11-201ENST00000411553 5696 ntBASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 PCED1CP-201ENST00000419887 785 ntBASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 AC092597.1-201ENST00000487352 616 ntBASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.68■□□□□ 0.74
SCN4BQ8IWT1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 VENTXP5-201ENST00000523979 775 ntBASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 ZNF444P1-201ENST00000559497 298 ntBASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 AC083849.1-201ENST00000615227 514 ntBASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 HYMAI.1-201ENST00000620949 238 ntBASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 AL157888.1-201ENST00000631930 593 ntBASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SCN4BQ8IWT1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SCN4BQ8IWT1 UPK3BP1-201ENST00000428678 509 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms