Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
APLFQ8IW19 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
APLFQ8IW19 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
APLFQ8IW19 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APLFQ8IW19 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.51■□□□□ 0.55
APLFQ8IW19 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
APLFQ8IW19 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.51■□□□□ 0.55
APLFQ8IW19 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
APLFQ8IW19 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.51■□□□□ 0.55
APLFQ8IW19 REXO1L10P-201ENST00000615707 1290 ntBASIC18.51■□□□□ 0.55
APLFQ8IW19 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.51■□□□□ 0.55
APLFQ8IW19 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
APLFQ8IW19 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
APLFQ8IW19 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APLFQ8IW19 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
APLFQ8IW19 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APLFQ8IW19 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
APLFQ8IW19 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APLFQ8IW19 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APLFQ8IW19 HLA-G-202ENST00000376815 851 ntBASIC18.5■□□□□ 0.55
APLFQ8IW19 HLA-G-203ENST00000376818 1127 ntBASIC18.5■□□□□ 0.55
APLFQ8IW19 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.5■□□□□ 0.55
APLFQ8IW19 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.5■□□□□ 0.55
APLFQ8IW19 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.5■□□□□ 0.55
APLFQ8IW19 MIR6786-201ENST00000616843 113 ntBASIC18.5■□□□□ 0.55
APLFQ8IW19 AC005363.2-201ENST00000618631 242 ntBASIC18.5■□□□□ 0.55
APLFQ8IW19 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APLFQ8IW19 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APLFQ8IW19 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
APLFQ8IW19 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
APLFQ8IW19 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.49■□□□□ 0.55
APLFQ8IW19 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.49■□□□□ 0.55
APLFQ8IW19 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.49■□□□□ 0.55
APLFQ8IW19 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
APLFQ8IW19 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 DPP3P2-201ENST00000416030 1696 ntBASIC18.49■□□□□ 0.55
APLFQ8IW19 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.49■□□□□ 0.55
APLFQ8IW19 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.49■□□□□ 0.55
APLFQ8IW19 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.49■□□□□ 0.55
APLFQ8IW19 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APLFQ8IW19 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.48■□□□□ 0.55
APLFQ8IW19 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
APLFQ8IW19 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
APLFQ8IW19 KSR1P1-201ENST00000446298 240 ntBASIC18.48■□□□□ 0.55
APLFQ8IW19 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.48■□□□□ 0.55
APLFQ8IW19 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 AL031963.3-201ENST00000606441 850 ntBASIC18.48■□□□□ 0.55
APLFQ8IW19 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.48■□□□□ 0.55
APLFQ8IW19 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 AL590326.2-201ENST00000625139 305 ntBASIC18.48■□□□□ 0.55
APLFQ8IW19 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.48■□□□□ 0.55
APLFQ8IW19 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
APLFQ8IW19 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
APLFQ8IW19 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
APLFQ8IW19 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms