Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 AC060766.5-201ENST00000590539 871 ntBASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 AL121832.2-201ENST00000610979 668 ntBASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NUDCD3Q8IVD9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 AC135776.1-201ENST00000319817 2481 ntBASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
NUDCD3Q8IVD9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 MTMR9LP-203ENST00000426597 1545 ntBASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 CROCCP5-201ENST00000436658 830 ntBASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 MIR5787-201ENST00000611784 55 ntBASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 HLA-A-209ENST00000638375 975 ntBASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NUDCD3Q8IVD9 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.55■□□□□ 0.56
NUDCD3Q8IVD9 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms