Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 AC239809.2-201ENST00000415381 517 ntBASIC16.63■□□□□ 0.25
LRRC28Q86X40 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 AC110285.5-201ENST00000611501 352 ntBASIC16.63■□□□□ 0.25
LRRC28Q86X40 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 AC073592.3-201ENST00000625118 1834 ntBASIC16.63■□□□□ 0.25
LRRC28Q86X40 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRRC28Q86X40 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LRRC28Q86X40 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 AC139713.2-201ENST00000641328 2723 ntBASIC16.62■□□□□ 0.25
LRRC28Q86X40 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 KRASP1-201ENST00000407852 552 ntBASIC16.62■□□□□ 0.25
LRRC28Q86X40 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 HTR7P1-202ENST00000624664 4411 ntBASIC16.62■□□□□ 0.25
LRRC28Q86X40 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.62■□□□□ 0.25
LRRC28Q86X40 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRRC28Q86X40 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 AC018553.1-201ENST00000616682 1458 ntBASIC16.61■□□□□ 0.25
LRRC28Q86X40 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 AC093827.2-201ENST00000512654 315 ntBASIC16.61■□□□□ 0.25
LRRC28Q86X40 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.61■□□□□ 0.25
LRRC28Q86X40 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC28Q86X40 ESPNP-201ENST00000270691 2015 ntBASIC16.61■□□□□ 0.25
LRRC28Q86X40 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms