Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.67■□□□□ 0.58
LDB1Q86U70 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 GPAT2P1-201ENST00000444924 1672 ntBASIC18.66■□□□□ 0.58
LDB1Q86U70 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LDB1Q86U70 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
LDB1Q86U70 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.66■□□□□ 0.58
LDB1Q86U70 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
LDB1Q86U70 UNC93B2-201ENST00000285383 730 ntBASIC18.66■□□□□ 0.58
LDB1Q86U70 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LDB1Q86U70 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.66■□□□□ 0.58
LDB1Q86U70 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
LDB1Q86U70 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.66■□□□□ 0.58
LDB1Q86U70 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.66■□□□□ 0.58
LDB1Q86U70 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LDB1Q86U70 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.66■□□□□ 0.58
LDB1Q86U70 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.66■□□□□ 0.58
LDB1Q86U70 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LDB1Q86U70 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LDB1Q86U70 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
LDB1Q86U70 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LDB1Q86U70 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.65■□□□□ 0.58
LDB1Q86U70 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LDB1Q86U70 MIR4497-201ENST00000583208 89 ntBASIC18.65■□□□□ 0.58
LDB1Q86U70 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.65■□□□□ 0.58
LDB1Q86U70 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.65■□□□□ 0.58
LDB1Q86U70 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LDB1Q86U70 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.65■□□□□ 0.58
LDB1Q86U70 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.65■□□□□ 0.58
LDB1Q86U70 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.65■□□□□ 0.58
LDB1Q86U70 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LDB1Q86U70 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LDB1Q86U70 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.64■□□□□ 0.58
LDB1Q86U70 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LDB1Q86U70 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LDB1Q86U70 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.64■□□□□ 0.58
LDB1Q86U70 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LDB1Q86U70 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.64■□□□□ 0.57
LDB1Q86U70 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
LDB1Q86U70 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
LDB1Q86U70 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.64■□□□□ 0.57
LDB1Q86U70 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.64■□□□□ 0.57
LDB1Q86U70 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.64■□□□□ 0.57
LDB1Q86U70 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 AL023284.2-201ENST00000405850 579 ntBASIC18.64■□□□□ 0.57
LDB1Q86U70 MIR1238-201ENST00000408483 83 ntBASIC18.64■□□□□ 0.57
LDB1Q86U70 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.64■□□□□ 0.57
LDB1Q86U70 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.64■□□□□ 0.57
LDB1Q86U70 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LDB1Q86U70 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
LDB1Q86U70 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LDB1Q86U70 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LDB1Q86U70 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LDB1Q86U70 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LDB1Q86U70 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LDB1Q86U70 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.63■□□□□ 0.57
LDB1Q86U70 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LDB1Q86U70 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.63■□□□□ 0.57
LDB1Q86U70 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.63■□□□□ 0.57
LDB1Q86U70 AC093827.2-201ENST00000512654 315 ntBASIC18.63■□□□□ 0.57
LDB1Q86U70 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms