Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 KRT8P41-201ENST00000533985 1514 ntBASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 ATP5G2P1-201ENST00000433580 426 ntBASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 PVRIG2P-201ENST00000435460 978 ntBASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC21.41■■□□□ 1.02
SH3RF1Q7Z6J0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF1Q7Z6J0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH3RF1Q7Z6J0 AL512353.2-201ENST00000448759 1962 ntBASIC21.39■■□□□ 1.02
SH3RF1Q7Z6J0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SH3RF1Q7Z6J0 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH3RF1Q7Z6J0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
SH3RF1Q7Z6J0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF1Q7Z6J0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 FDX1P1-201ENST00000449115 551 ntBASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 CA15P1-201ENST00000481698 905 ntBASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 Z98044.1-201ENST00000632503 1764 ntBASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF1Q7Z6J0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.37■■□□□ 1.01
SH3RF1Q7Z6J0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF1Q7Z6J0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SH3RF1Q7Z6J0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
SH3RF1Q7Z6J0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SH3RF1Q7Z6J0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms