Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NIPAL3Q6P499 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 RCC2P6-201ENST00000526625 1557 ntBASIC17.02■□□□□ 0.32
NIPAL3Q6P499 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 AC004951.3-201ENST00000418645 1148 ntBASIC17.02■□□□□ 0.32
NIPAL3Q6P499 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 TSPY21P-201ENST00000433481 731 ntBASIC17.02■□□□□ 0.32
NIPAL3Q6P499 AL355355.2-201ENST00000442321 338 ntBASIC17.02■□□□□ 0.32
NIPAL3Q6P499 AC093827.2-201ENST00000512654 315 ntBASIC17.02■□□□□ 0.32
NIPAL3Q6P499 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 AC011298.2-201ENST00000617989 482 ntBASIC17.02■□□□□ 0.32
NIPAL3Q6P499 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NIPAL3Q6P499 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 NOC2LP2-201ENST00000407594 1944 ntBASIC17.02■□□□□ 0.31
NIPAL3Q6P499 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
NIPAL3Q6P499 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 KRT8P41-201ENST00000533985 1514 ntBASIC17.01■□□□□ 0.31
NIPAL3Q6P499 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 TSPY7P-201ENST00000431358 1114 ntBASIC17.01■□□□□ 0.31
NIPAL3Q6P499 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 SNORA78-201ENST00000459373 127 ntBASIC17.01■□□□□ 0.31
NIPAL3Q6P499 NUDT16P1-203ENST00000513809 620 ntBASIC17.01■□□□□ 0.31
NIPAL3Q6P499 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 AC026471.5-201ENST00000615068 467 ntBASIC17.01■□□□□ 0.31
NIPAL3Q6P499 MIR6786-201ENST00000616843 113 ntBASIC17.01■□□□□ 0.31
NIPAL3Q6P499 AC066615.1-201ENST00000640911 628 ntBASIC17.01■□□□□ 0.31
NIPAL3Q6P499 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NIPAL3Q6P499 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17■□□□□ 0.31
NIPAL3Q6P499 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NIPAL3Q6P499 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17■□□□□ 0.31
NIPAL3Q6P499 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17■□□□□ 0.31
NIPAL3Q6P499 GAS2L1P1-201ENST00000420145 1480 ntBASIC17■□□□□ 0.31
NIPAL3Q6P499 FSCN1P1-201ENST00000568912 1481 ntBASIC17■□□□□ 0.31
NIPAL3Q6P499 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17■□□□□ 0.31
NIPAL3Q6P499 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NIPAL3Q6P499 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms