Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRK2Q5S007 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRK2Q5S007 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.17■□□□□ 0.18
LRRK2Q5S007 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
LRRK2Q5S007 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
LRRK2Q5S007 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
LRRK2Q5S007 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
LRRK2Q5S007 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRK2Q5S007 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRK2Q5S007 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 AF228730.6-201ENST00000641497 218 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 AC084121.3-201ENST00000641716 218 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 AC105233.6-201ENST00000642093 218 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 TP73-AS1-210ENST00000637775 1455 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRK2Q5S007 ZNF815P-204ENST00000434898 1737 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 EP400NL-214ENST00000641289 2402 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LRRK2Q5S007 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 AP002472.1-201ENST00000577490 586 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 AC133561.1-201ENST00000568600 2415 ntBASIC16.16■□□□□ 0.18
LRRK2Q5S007 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
LRRK2Q5S007 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.16■□□□□ 0.18
LRRK2Q5S007 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 AC099343.3-201ENST00000605834 2503 ntBASIC16.15■□□□□ 0.18
LRRK2Q5S007 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 OR7E14P-202ENST00000530490 1290 ntBASIC16.15■□□□□ 0.18
LRRK2Q5S007 AC104390.1-201ENST00000555663 520 ntBASIC16.15■□□□□ 0.18
LRRK2Q5S007 AC005829.1-201ENST00000570002 483 ntBASIC16.15■□□□□ 0.18
LRRK2Q5S007 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRK2Q5S007 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRK2Q5S007 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRK2Q5S007 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LRRK2Q5S007 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
LRRK2Q5S007 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.18
LRRK2Q5S007 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 AC087641.1-201ENST00000557561 1021 ntBASIC16.14■□□□□ 0.17
LRRK2Q5S007 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 AC027612.4-201ENST00000605371 583 ntBASIC16.14■□□□□ 0.17
LRRK2Q5S007 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 AP005212.1-201ENST00000581547 1997 ntBASIC16.14■□□□□ 0.17
LRRK2Q5S007 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRK2Q5S007 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRK2Q5S007 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms