Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 TSPY22P-201ENST00000427496 604 ntBASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 AC012615.1-201ENST00000565797 1299 ntBASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 AL671883.3-201ENST00000603274 991 ntBASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CTC1Q2NKJ3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 AP000867.3-201ENST00000524675 377 ntBASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 LINC01711-201ENST00000598340 967 ntBASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTC1Q2NKJ3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 SEC1P-202ENST00000473944 940 ntBASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 FOSL1P1-201ENST00000511041 816 ntBASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CTC1Q2NKJ3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 LINC00265-3P-201ENST00000447588 903 ntBASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.93■□□□□ 0.78
CTC1Q2NKJ3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms