Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 RNA5SP415-201ENST00000517246 115 ntBASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RSPO4Q2I0M5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 MIR770-201ENST00000390219 98 ntBASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 AL645939.2-201ENST00000427340 991 ntBASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 SNHG9-202ENST00000564014 471 ntBASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 MTDHP5-201ENST00000598980 586 ntBASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RSPO4Q2I0M5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 HLA-J-201ENST00000462773 1622 ntBASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 RBM17P3-201ENST00000417687 1192 ntBASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 AP001269.4-201ENST00000609611 512 ntBASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RSPO4Q2I0M5 TREX1-205ENST00000625293 1783 ntBASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 SMG8-203ENST00000578922 2178 ntBASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 AC023274.1-201ENST00000418278 595 ntBASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 AC104390.1-201ENST00000555663 520 ntBASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
RSPO4Q2I0M5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms