Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
IRX4P78413 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IRX4P78413 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
IRX4P78413 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
IRX4P78413 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.41■□□□□ 0.7
IRX4P78413 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.41■□□□□ 0.7
IRX4P78413 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX4P78413 AC130371.2-201ENST00000619443 611 ntBASIC19.41■□□□□ 0.7
IRX4P78413 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.41■□□□□ 0.7
IRX4P78413 AL138966.2-201ENST00000621997 464 ntBASIC19.41■□□□□ 0.7
IRX4P78413 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.41■□□□□ 0.7
IRX4P78413 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
IRX4P78413 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.41■□□□□ 0.7
IRX4P78413 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IRX4P78413 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IRX4P78413 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
IRX4P78413 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
IRX4P78413 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
IRX4P78413 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX4P78413 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.4■□□□□ 0.7
IRX4P78413 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.4■□□□□ 0.7
IRX4P78413 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
IRX4P78413 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.4■□□□□ 0.7
IRX4P78413 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
IRX4P78413 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IRX4P78413 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
IRX4P78413 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
IRX4P78413 AL049812.1-201ENST00000432563 2267 ntBASIC19.39■□□□□ 0.69
IRX4P78413 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
IRX4P78413 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.39■□□□□ 0.69
IRX4P78413 TSPY5P-201ENST00000426936 936 ntBASIC19.39■□□□□ 0.69
IRX4P78413 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
IRX4P78413 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IRX4P78413 YBX1P2-201ENST00000489612 999 ntBASIC19.39■□□□□ 0.69
IRX4P78413 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.39■□□□□ 0.69
IRX4P78413 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX4P78413 AP000692.2-201ENST00000608391 879 ntBASIC19.39■□□□□ 0.69
IRX4P78413 AP000550.4-202ENST00000639755 178 ntBASIC19.39■□□□□ 0.69
IRX4P78413 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.69
IRX4P78413 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IRX4P78413 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IRX4P78413 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IRX4P78413 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.39■□□□□ 0.69
IRX4P78413 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IRX4P78413 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.39■□□□□ 0.69
IRX4P78413 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IRX4P78413 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
IRX4P78413 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
IRX4P78413 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.38■□□□□ 0.69
IRX4P78413 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
IRX4P78413 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.38■□□□□ 0.69
IRX4P78413 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 AC009947.2-201ENST00000444014 672 ntBASIC19.38■□□□□ 0.69
IRX4P78413 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.38■□□□□ 0.69
IRX4P78413 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.38■□□□□ 0.69
IRX4P78413 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
IRX4P78413 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IRX4P78413 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.38■□□□□ 0.69
IRX4P78413 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.38■□□□□ 0.69
IRX4P78413 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms