Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA4AP68366 ESRRAP1-201ENST00000400596 1257 ntBASIC17.53■□□□□ 0.4
TUBA4AP68366 AL390719.1-204ENST00000412397 1219 ntBASIC17.53■□□□□ 0.4
TUBA4AP68366 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.53■□□□□ 0.4
TUBA4AP68366 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA4AP68366 AL139384.1-201ENST00000612143 3047 ntBASIC17.53■□□□□ 0.4
TUBA4AP68366 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA4AP68366 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA4AP68366 KRT8P20-201ENST00000423953 1409 ntBASIC17.53■□□□□ 0.4
TUBA4AP68366 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA4AP68366 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.53■□□□□ 0.4
TUBA4AP68366 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA4AP68366 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBA4AP68366 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA4AP68366 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TUBA4AP68366 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBA4AP68366 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TUBA4AP68366 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA4AP68366 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.52■□□□□ 0.4
TUBA4AP68366 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBA4AP68366 AC005829.2-201ENST00000571422 1056 ntBASIC17.52■□□□□ 0.4
TUBA4AP68366 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBA4AP68366 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBA4AP68366 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBA4AP68366 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBA4AP68366 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TUBA4AP68366 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA4AP68366 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA4AP68366 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA4AP68366 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA4AP68366 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA4AP68366 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA4AP68366 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBA4AP68366 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA4AP68366 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.52■□□□□ 0.39
TUBA4AP68366 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 ABHD17AP1-201ENST00000358206 933 ntBASIC17.51■□□□□ 0.39
TUBA4AP68366 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 FAM201B-201ENST00000458407 597 ntBASIC17.51■□□□□ 0.39
TUBA4AP68366 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 AP003097.1-201ENST00000530657 1135 ntBASIC17.51■□□□□ 0.39
TUBA4AP68366 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBA4AP68366 AL645608.8-201ENST00000606034 2086 ntBASIC17.51■□□□□ 0.39
TUBA4AP68366 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBA4AP68366 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBA4AP68366 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA4AP68366 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA4AP68366 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TUBA4AP68366 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms