Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 AC009065.1-201ENST00000564055 1225 ntBASIC20.29■□□□□ 0.84
SNRPFP62306 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 AL499627.1-201ENST00000569373 2188 ntBASIC20.29■□□□□ 0.84
SNRPFP62306 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SNRPFP62306 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.29■□□□□ 0.84
SNRPFP62306 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRPFP62306 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.29■□□□□ 0.84
SNRPFP62306 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNRPFP62306 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SNRPFP62306 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SNRPFP62306 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
SNRPFP62306 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SNRPFP62306 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 AC120498.9-201ENST00000339021 3867 ntBASIC20.28■□□□□ 0.84
SNRPFP62306 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRPFP62306 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRPFP62306 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
SNRPFP62306 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRPFP62306 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.28■□□□□ 0.84
SNRPFP62306 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRPFP62306 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 AC005363.2-201ENST00000618631 242 ntBASIC20.28■□□□□ 0.84
SNRPFP62306 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SNRPFP62306 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
SNRPFP62306 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.28■□□□□ 0.84
SNRPFP62306 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNRPFP62306 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPFP62306 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 AL020996.1-203ENST00000536896 2307 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPFP62306 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPFP62306 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 AC113347.1-201ENST00000413321 391 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 AC211429.1-201ENST00000415277 523 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 AC009947.2-201ENST00000444014 672 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPFP62306 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.27■□□□□ 0.84
SNRPFP62306 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 LINC01023-201ENST00000606054 436 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 AC141257.4-201ENST00000634557 245 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 AC136944.6-201ENST00000634818 245 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPFP62306 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.27■□□□□ 0.84
SNRPFP62306 AC090164.3-201ENST00000610780 2143 ntBASIC20.27■□□□□ 0.84
SNRPFP62306 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNRPFP62306 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.27■□□□□ 0.84
SNRPFP62306 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNRPFP62306 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNRPFP62306 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNRPFP62306 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNRPFP62306 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SNRPFP62306 AL163051.1-201ENST00000569214 1512 ntBASIC20.27■□□□□ 0.83
SNRPFP62306 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNRPFP62306 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNRPFP62306 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.26■□□□□ 0.83
SNRPFP62306 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNRPFP62306 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SNRPFP62306 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.26■□□□□ 0.83
SNRPFP62306 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.26■□□□□ 0.83
SNRPFP62306 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRPFP62306 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.26■□□□□ 0.83
SNRPFP62306 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SNRPFP62306 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms