Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNRPEP62304 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNRPEP62304 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SNRPEP62304 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SNRPEP62304 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.38□□□□□ -0.11
SNRPEP62304 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.38□□□□□ -0.11
SNRPEP62304 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SNRPEP62304 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC14.37□□□□□ -0.11
SNRPEP62304 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.37□□□□□ -0.11
SNRPEP62304 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.37□□□□□ -0.11
SNRPEP62304 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 C8orf49-201ENST00000525043 1968 ntBASIC14.37□□□□□ -0.11
SNRPEP62304 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
SNRPEP62304 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC14.37□□□□□ -0.11
SNRPEP62304 LONRF2P2-201ENST00000439212 571 ntBASIC14.37□□□□□ -0.11
SNRPEP62304 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 AC087239.1-201ENST00000622671 572 ntBASIC14.37□□□□□ -0.11
SNRPEP62304 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SNRPEP62304 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SNRPEP62304 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.37□□□□□ -0.11
SNRPEP62304 DBET-201ENST00000630918 3363 ntBASIC14.37□□□□□ -0.11
SNRPEP62304 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.37□□□□□ -0.11
SNRPEP62304 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.37□□□□□ -0.11
SNRPEP62304 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNRPEP62304 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 NFIC-211ENST00000641145 8399 ntBASIC14.36□□□□□ -0.11
SNRPEP62304 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.36□□□□□ -0.11
SNRPEP62304 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.36□□□□□ -0.11
SNRPEP62304 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 AC007950.2-201ENST00000615045 2347 ntBASIC14.36□□□□□ -0.11
SNRPEP62304 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.36□□□□□ -0.11
SNRPEP62304 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.36□□□□□ -0.11
SNRPEP62304 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SNRPEP62304 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
SNRPEP62304 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SNRPEP62304 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.36□□□□□ -0.11
SNRPEP62304 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNRPEP62304 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
SNRPEP62304 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNRPEP62304 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SNRPEP62304 RBM38-205ENST00000440234 686 ntTSL 2 BASIC14.35□□□□□ -0.11
SNRPEP62304 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms