Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.08□□□□□ -0.32
CKS1BP61024 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CKS1BP61024 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CKS1BP61024 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
CKS1BP61024 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS1BP61024 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS1BP61024 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.07□□□□□ -0.32
CKS1BP61024 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 AC068587.6-202ENST00000641839 5619 ntBASIC13.07□□□□□ -0.32
CKS1BP61024 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CKS1BP61024 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 KRT18P68-201ENST00000392293 1000 ntBASIC13.07□□□□□ -0.32
CKS1BP61024 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CKS1BP61024 AC016405.3-201ENST00000607710 860 ntBASIC13.07□□□□□ -0.32
CKS1BP61024 AC008694.1-202ENST00000636953 945 ntBASIC13.07□□□□□ -0.32
CKS1BP61024 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CKS1BP61024 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.07□□□□□ -0.32
CKS1BP61024 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CKS1BP61024 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CKS1BP61024 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC13.06□□□□□ -0.32
CKS1BP61024 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
CKS1BP61024 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.06□□□□□ -0.32
CKS1BP61024 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.06□□□□□ -0.32
CKS1BP61024 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.06□□□□□ -0.32
CKS1BP61024 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
CKS1BP61024 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CKS1BP61024 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.06□□□□□ -0.32
CKS1BP61024 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CKS1BP61024 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CKS1BP61024 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 FLJ38576-201ENST00000623820 2459 ntBASIC13.05□□□□□ -0.32
CKS1BP61024 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
CKS1BP61024 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.05□□□□□ -0.32
CKS1BP61024 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.05□□□□□ -0.32
CKS1BP61024 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CKS1BP61024 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms