Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NCKAP1LP55160 AC112777.1-201ENST00000540175 1423 ntBASIC20.44■□□□□ 0.86
NCKAP1LP55160 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.44■□□□□ 0.86
NCKAP1LP55160 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCKAP1LP55160 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NCKAP1LP55160 AP000593.1-201ENST00000393668 712 ntBASIC20.44■□□□□ 0.86
NCKAP1LP55160 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKAP1LP55160 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKAP1LP55160 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKAP1LP55160 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKAP1LP55160 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NCKAP1LP55160 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NCKAP1LP55160 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 MYC-208ENST00000641036 567 ntBASIC20.43■□□□□ 0.86
NCKAP1LP55160 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NCKAP1LP55160 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
NCKAP1LP55160 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 AL138781.2-201ENST00000617896 1843 ntBASIC20.42■□□□□ 0.86
NCKAP1LP55160 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 AK4P3-201ENST00000418260 669 ntBASIC20.42■□□□□ 0.86
NCKAP1LP55160 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.42■□□□□ 0.86
NCKAP1LP55160 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NCKAP1LP55160 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 AC004408.2-201ENST00000623613 2777 ntBASIC20.41■□□□□ 0.86
NCKAP1LP55160 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 AC140113.3-201ENST00000605663 199 ntBASIC20.41■□□□□ 0.86
NCKAP1LP55160 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
NCKAP1LP55160 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NCKAP1LP55160 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms