Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NR1H2P55055 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 UBE2SP1-201ENST00000450587 669 ntBASIC17.7■□□□□ 0.42
NR1H2P55055 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 C2orf69P4-201ENST00000565394 541 ntBASIC17.7■□□□□ 0.42
NR1H2P55055 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.7■□□□□ 0.42
NR1H2P55055 AC008403.3-201ENST00000598924 454 ntBASIC17.7■□□□□ 0.42
NR1H2P55055 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.7■□□□□ 0.42
NR1H2P55055 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
NR1H2P55055 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NR1H2P55055 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.7■□□□□ 0.42
NR1H2P55055 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NR1H2P55055 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NR1H2P55055 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NR1H2P55055 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.69■□□□□ 0.42
NR1H2P55055 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.69■□□□□ 0.42
NR1H2P55055 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.69■□□□□ 0.42
NR1H2P55055 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
NR1H2P55055 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.69■□□□□ 0.42
NR1H2P55055 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 SOX15-203ENST00000570788 1093 ntBASIC17.69■□□□□ 0.42
NR1H2P55055 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.69■□□□□ 0.42
NR1H2P55055 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NR1H2P55055 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NR1H2P55055 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NR1H2P55055 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NR1H2P55055 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NR1H2P55055 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.68■□□□□ 0.42
NR1H2P55055 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.68■□□□□ 0.42
NR1H2P55055 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
NR1H2P55055 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.68■□□□□ 0.42
NR1H2P55055 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.68■□□□□ 0.42
NR1H2P55055 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.68■□□□□ 0.42
NR1H2P55055 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.68■□□□□ 0.42
NR1H2P55055 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.68■□□□□ 0.42
NR1H2P55055 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NR1H2P55055 AC134043.2-201ENST00000624206 2238 ntBASIC17.68■□□□□ 0.42
NR1H2P55055 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NR1H2P55055 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NR1H2P55055 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms