Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.98■□□□□ 0.95
EPHB4P54760 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
EPHB4P54760 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB4P54760 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.97■□□□□ 0.95
EPHB4P54760 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.97■□□□□ 0.95
EPHB4P54760 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.97■□□□□ 0.95
EPHB4P54760 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.97■□□□□ 0.95
EPHB4P54760 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
EPHB4P54760 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
EPHB4P54760 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
EPHB4P54760 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
EPHB4P54760 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.96■□□□□ 0.95
EPHB4P54760 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.96■□□□□ 0.95
EPHB4P54760 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.96■□□□□ 0.95
EPHB4P54760 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EPHB4P54760 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 AC079781.3-201ENST00000449110 356 ntBASIC20.96■□□□□ 0.95
EPHB4P54760 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.96■□□□□ 0.95
EPHB4P54760 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.96■□□□□ 0.95
EPHB4P54760 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.96■□□□□ 0.95
EPHB4P54760 AL732292.2-201ENST00000609649 430 ntBASIC20.96■□□□□ 0.95
EPHB4P54760 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.96■□□□□ 0.95
EPHB4P54760 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
EPHB4P54760 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.96■□□□□ 0.95
EPHB4P54760 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.96■□□□□ 0.95
EPHB4P54760 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
EPHB4P54760 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
EPHB4P54760 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.95■□□□□ 0.94
EPHB4P54760 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB4P54760 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.95■□□□□ 0.94
EPHB4P54760 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
EPHB4P54760 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 BX276092.5-203ENST00000456199 560 ntBASIC20.95■□□□□ 0.94
EPHB4P54760 RASA4DP-201ENST00000460726 1199 ntBASIC20.95■□□□□ 0.94
EPHB4P54760 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.95■□□□□ 0.94
EPHB4P54760 AP002414.4-201ENST00000589764 1148 ntBASIC20.95■□□□□ 0.94
EPHB4P54760 AL121672.3-201ENST00000608644 468 ntBASIC20.95■□□□□ 0.94
EPHB4P54760 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB4P54760 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.95■□□□□ 0.94
EPHB4P54760 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
EPHB4P54760 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.95■□□□□ 0.94
EPHB4P54760 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.95■□□□□ 0.94
EPHB4P54760 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
EPHB4P54760 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHB4P54760 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
EPHB4P54760 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 AC093503.3-201ENST00000624917 2352 ntBASIC20.94■□□□□ 0.94
EPHB4P54760 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHB4P54760 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHB4P54760 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EPHB4P54760 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.94■□□□□ 0.94
EPHB4P54760 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.94■□□□□ 0.94
EPHB4P54760 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
EPHB4P54760 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
EPHB4P54760 NUS1P1-201ENST00000446295 882 ntBASIC20.94■□□□□ 0.94
EPHB4P54760 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHB4P54760 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.94■□□□□ 0.94
EPHB4P54760 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
EPHB4P54760 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.94■□□□□ 0.94
EPHB4P54760 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms