Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC087289.5-201ENST00000586076 3175 ntBASIC18.13■□□□□ 0.49
PDX1P52945 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDX1P52945 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PDX1P52945 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDX1P52945 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDX1P52945 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDX1P52945 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.12■□□□□ 0.49
PDX1P52945 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.12■□□□□ 0.49
PDX1P52945 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
PDX1P52945 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PDX1P52945 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.12■□□□□ 0.49
PDX1P52945 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PDX1P52945 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.12■□□□□ 0.49
PDX1P52945 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
PDX1P52945 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.12■□□□□ 0.49
PDX1P52945 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PDX1P52945 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PDX1P52945 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 AL023284.2-201ENST00000405850 579 ntBASIC18.11■□□□□ 0.49
PDX1P52945 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.11■□□□□ 0.49
PDX1P52945 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.11■□□□□ 0.49
PDX1P52945 AC034232.1-201ENST00000506026 1064 ntBASIC18.11■□□□□ 0.49
PDX1P52945 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.11■□□□□ 0.49
PDX1P52945 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 AC024243.1-201ENST00000609234 778 ntBASIC18.11■□□□□ 0.49
PDX1P52945 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.11■□□□□ 0.49
PDX1P52945 AL691432.3-201ENST00000621860 400 ntBASIC18.11■□□□□ 0.49
PDX1P52945 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.11■□□□□ 0.49
PDX1P52945 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PDX1P52945 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.11■□□□□ 0.49
PDX1P52945 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.11■□□□□ 0.49
PDX1P52945 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.11■□□□□ 0.49
PDX1P52945 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 AL032819.2-201ENST00000624543 2162 ntBASIC18.11■□□□□ 0.49
PDX1P52945 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PDX1P52945 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
PDX1P52945 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDX1P52945 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
PDX1P52945 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDX1P52945 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.1■□□□□ 0.49
PDX1P52945 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PDX1P52945 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PDX1P52945 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PDX1P52945 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.1■□□□□ 0.49
PDX1P52945 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.09■□□□□ 0.49
PDX1P52945 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PDX1P52945 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PDX1P52945 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
PDX1P52945 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.09■□□□□ 0.49
PDX1P52945 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms