Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 MIR564-202ENST00000385049 94 ntBASIC17.5■□□□□ 0.39
EFNA3P52797 STARP1-201ENST00000397973 869 ntBASIC17.5■□□□□ 0.39
EFNA3P52797 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.5■□□□□ 0.39
EFNA3P52797 HOMER2P1-201ENST00000455653 964 ntBASIC17.5■□□□□ 0.39
EFNA3P52797 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.5■□□□□ 0.39
EFNA3P52797 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
EFNA3P52797 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.5■□□□□ 0.39
EFNA3P52797 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
EFNA3P52797 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
EFNA3P52797 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.5■□□□□ 0.39
EFNA3P52797 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
EFNA3P52797 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.5■□□□□ 0.39
EFNA3P52797 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.5■□□□□ 0.39
EFNA3P52797 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
EFNA3P52797 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.49■□□□□ 0.39
EFNA3P52797 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
EFNA3P52797 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
EFNA3P52797 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
EFNA3P52797 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
EFNA3P52797 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.49■□□□□ 0.39
EFNA3P52797 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 AC112907.2-201ENST00000448639 330 ntBASIC17.49■□□□□ 0.39
EFNA3P52797 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.49■□□□□ 0.39
EFNA3P52797 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.49■□□□□ 0.39
EFNA3P52797 AC092597.1-201ENST00000487352 616 ntBASIC17.49■□□□□ 0.39
EFNA3P52797 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.49■□□□□ 0.39
EFNA3P52797 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.49■□□□□ 0.39
EFNA3P52797 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
EFNA3P52797 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.49■□□□□ 0.39
EFNA3P52797 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.49■□□□□ 0.39
EFNA3P52797 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNA3P52797 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.48■□□□□ 0.39
EFNA3P52797 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNA3P52797 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.48■□□□□ 0.39
EFNA3P52797 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
EFNA3P52797 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
EFNA3P52797 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.48■□□□□ 0.39
EFNA3P52797 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.48■□□□□ 0.39
EFNA3P52797 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
EFNA3P52797 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.48■□□□□ 0.39
EFNA3P52797 AL671277.2-201ENST00000458060 996 ntBASIC17.48■□□□□ 0.39
EFNA3P52797 FAM86EP-206ENST00000510506 987 ntBASIC17.48■□□□□ 0.39
EFNA3P52797 AC079602.3-201ENST00000623931 403 ntBASIC17.48■□□□□ 0.39
EFNA3P52797 AL358472.4-201ENST00000633140 710 ntBASIC17.48■□□□□ 0.39
EFNA3P52797 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.48■□□□□ 0.39
EFNA3P52797 AL357033.4-201ENST00000617703 1807 ntBASIC17.48■□□□□ 0.39
EFNA3P52797 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNA3P52797 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.48■□□□□ 0.39
EFNA3P52797 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNA3P52797 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
EFNA3P52797 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
EFNA3P52797 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.47■□□□□ 0.39
EFNA3P52797 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
EFNA3P52797 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.47■□□□□ 0.39
EFNA3P52797 RASA4DP-201ENST00000460726 1199 ntBASIC17.47■□□□□ 0.39
EFNA3P52797 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.47■□□□□ 0.39
EFNA3P52797 AC112497.1-201ENST00000624824 639 ntBASIC17.47■□□□□ 0.39
EFNA3P52797 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
EFNA3P52797 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 AC006333.2-201ENST00000607957 2099 ntBASIC17.47■□□□□ 0.39
EFNA3P52797 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
EFNA3P52797 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
EFNA3P52797 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
EFNA3P52797 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
EFNA3P52797 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.46■□□□□ 0.39
EFNA3P52797 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
EFNA3P52797 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.46■□□□□ 0.39
EFNA3P52797 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNA3P52797 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
EFNA3P52797 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNA3P52797 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNA3P52797 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNA3P52797 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
EFNA3P52797 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms