Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF140P52738 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
ZNF140P52738 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ZNF140P52738 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 KRT18P22-201ENST00000402024 1347 ntBASIC18.58■□□□□ 0.57
ZNF140P52738 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF140P52738 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.56
ZNF140P52738 AP000593.1-201ENST00000393668 712 ntBASIC18.58■□□□□ 0.56
ZNF140P52738 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF140P52738 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF140P52738 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.58■□□□□ 0.56
ZNF140P52738 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.58■□□□□ 0.56
ZNF140P52738 MYLKP1-201ENST00000509077 1580 ntBASIC18.58■□□□□ 0.56
ZNF140P52738 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF140P52738 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
ZNF140P52738 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 HOXB1-202ENST00000577092 1414 ntBASIC18.57■□□□□ 0.56
ZNF140P52738 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF140P52738 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF140P52738 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF140P52738 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.57■□□□□ 0.56
ZNF140P52738 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.57■□□□□ 0.56
ZNF140P52738 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ZNF140P52738 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
ZNF140P52738 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.57■□□□□ 0.56
ZNF140P52738 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF140P52738 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF140P52738 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF140P52738 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF140P52738 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF140P52738 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF140P52738 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF140P52738 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF140P52738 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.56■□□□□ 0.56
ZNF140P52738 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF140P52738 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF140P52738 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF140P52738 AC012306.2-201ENST00000609350 630 ntBASIC18.56■□□□□ 0.56
ZNF140P52738 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF140P52738 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
ZNF140P52738 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
ZNF140P52738 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF140P52738 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF140P52738 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF140P52738 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF140P52738 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF140P52738 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF140P52738 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.55■□□□□ 0.56
ZNF140P52738 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF140P52738 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms