Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.27■□□□□ 0.2
HCFC1P51610 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
HCFC1P51610 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1P51610 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1P51610 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1P51610 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.27■□□□□ 0.19
HCFC1P51610 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCFC1P51610 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
HCFC1P51610 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
HCFC1P51610 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC1P51610 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HCFC1P51610 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HCFC1P51610 Z83836.1-201ENST00000624605 1642 ntBASIC16.26■□□□□ 0.19
HCFC1P51610 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HCFC1P51610 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC1P51610 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.26■□□□□ 0.19
HCFC1P51610 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HCFC1P51610 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.26■□□□□ 0.19
HCFC1P51610 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.26■□□□□ 0.19
HCFC1P51610 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.26■□□□□ 0.19
HCFC1P51610 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 AL662844.1-201ENST00000546340 181 ntBASIC16.26■□□□□ 0.19
HCFC1P51610 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC1P51610 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HCFC1P51610 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HCFC1P51610 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCFC1P51610 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.26■□□□□ 0.19
HCFC1P51610 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC1P51610 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC1P51610 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 KRT8P7-201ENST00000533003 1432 ntBASIC16.25■□□□□ 0.19
HCFC1P51610 Z82202.1-201ENST00000623446 1880 ntBASIC16.25■□□□□ 0.19
HCFC1P51610 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC1P51610 AL121912.1-201ENST00000603683 238 ntBASIC16.25■□□□□ 0.19
HCFC1P51610 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC1P51610 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HCFC1P51610 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC1P51610 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC1P51610 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC16.25■□□□□ 0.19
HCFC1P51610 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.25■□□□□ 0.19
HCFC1P51610 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HCFC1P51610 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
HCFC1P51610 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCFC1P51610 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 RNA5SP419-201ENST00000515908 135 ntBASIC16.24■□□□□ 0.19
HCFC1P51610 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
HCFC1P51610 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.24■□□□□ 0.19
HCFC1P51610 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
HCFC1P51610 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.24■□□□□ 0.19
HCFC1P51610 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.24■□□□□ 0.19
HCFC1P51610 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.24■□□□□ 0.19
HCFC1P51610 AL390719.2-201ENST00000606993 987 ntBASIC16.24■□□□□ 0.19
HCFC1P51610 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
HCFC1P51610 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms