Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 AC099343.3-201ENST00000605834 2503 ntBASIC17.38■□□□□ 0.37
RNF144AP50876 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
RNF144AP50876 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RNF144AP50876 CRYGFP-201ENST00000418459 633 ntBASIC17.38■□□□□ 0.37
RNF144AP50876 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.38■□□□□ 0.37
RNF144AP50876 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF144AP50876 CKBP1-201ENST00000565489 1086 ntBASIC17.38■□□□□ 0.37
RNF144AP50876 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.38■□□□□ 0.37
RNF144AP50876 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF144AP50876 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF144AP50876 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF144AP50876 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF144AP50876 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF144AP50876 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 AC009113.1-201ENST00000570267 2443 ntBASIC17.38■□□□□ 0.37
RNF144AP50876 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF144AP50876 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF144AP50876 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF144AP50876 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.37■□□□□ 0.37
RNF144AP50876 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF144AP50876 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
RNF144AP50876 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RNF144AP50876 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF144AP50876 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.37■□□□□ 0.37
RNF144AP50876 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RNF144AP50876 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 MFAP1P1-201ENST00000442257 1255 ntBASIC17.37■□□□□ 0.37
RNF144AP50876 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF144AP50876 AC097488.1-201ENST00000507834 756 ntBASIC17.37■□□□□ 0.37
RNF144AP50876 AC093827.2-201ENST00000512654 315 ntBASIC17.37■□□□□ 0.37
RNF144AP50876 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF144AP50876 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.37■□□□□ 0.37
RNF144AP50876 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 AP000525.1-201ENST00000608286 694 ntBASIC17.37■□□□□ 0.37
RNF144AP50876 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RNF144AP50876 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF144AP50876 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF144AP50876 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF144AP50876 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 AL031598.1-201ENST00000561511 1773 ntBASIC17.36■□□□□ 0.37
RNF144AP50876 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF144AP50876 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 MIR718-201ENST00000390190 70 ntBASIC17.36■□□□□ 0.37
RNF144AP50876 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF144AP50876 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF144AP50876 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF144AP50876 AP001412.1-201ENST00000608405 714 ntBASIC17.36■□□□□ 0.37
RNF144AP50876 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF144AP50876 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF144AP50876 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RNF144AP50876 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF144AP50876 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RNF144AP50876 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
RNF144AP50876 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF144AP50876 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms