Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK7P50613 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDK7P50613 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK7P50613 MIR564-202ENST00000385049 94 ntBASIC20.63■□□□□ 0.89
CDK7P50613 TSPY12P-201ENST00000421279 868 ntBASIC20.63■□□□□ 0.89
CDK7P50613 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK7P50613 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK7P50613 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK7P50613 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.63■□□□□ 0.89
CDK7P50613 GPR32P1-201ENST00000601788 811 ntBASIC20.63■□□□□ 0.89
CDK7P50613 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.63■□□□□ 0.89
CDK7P50613 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK7P50613 TCF3P1-201ENST00000423021 1937 ntBASIC20.63■□□□□ 0.89
CDK7P50613 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CDK7P50613 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK7P50613 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CDK7P50613 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK7P50613 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK7P50613 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.62■□□□□ 0.89
CDK7P50613 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.62■□□□□ 0.89
CDK7P50613 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.62■□□□□ 0.89
CDK7P50613 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.62■□□□□ 0.89
CDK7P50613 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CDK7P50613 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.62■□□□□ 0.89
CDK7P50613 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDK7P50613 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDK7P50613 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.62■□□□□ 0.89
CDK7P50613 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.62■□□□□ 0.89
CDK7P50613 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK7P50613 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.62■□□□□ 0.89
CDK7P50613 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDK7P50613 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDK7P50613 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CDK7P50613 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDK7P50613 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK7P50613 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CDK7P50613 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK7P50613 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK7P50613 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDK7P50613 IGHGP-201ENST00000390555 1178 ntBASIC20.61■□□□□ 0.89
CDK7P50613 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
CDK7P50613 RNA5SP419-201ENST00000515908 135 ntBASIC20.61■□□□□ 0.89
CDK7P50613 MIR3180-4-201ENST00000582223 153 ntBASIC20.61■□□□□ 0.89
CDK7P50613 REXO1L6P-202ENST00000619970 1078 ntBASIC20.61■□□□□ 0.89
CDK7P50613 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK7P50613 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK7P50613 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDK7P50613 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CDK7P50613 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDK7P50613 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK7P50613 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.61■□□□□ 0.89
CDK7P50613 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.61■□□□□ 0.89
CDK7P50613 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK7P50613 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK7P50613 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDK7P50613 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDK7P50613 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK7P50613 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK7P50613 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK7P50613 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK7P50613 AL590627.1-203ENST00000421194 1026 ntBASIC20.6■□□□□ 0.89
CDK7P50613 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CDK7P50613 AF238378.1-201ENST00000526806 358 ntBASIC20.6■□□□□ 0.89
CDK7P50613 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK7P50613 AC120114.3-201ENST00000611923 658 ntBASIC20.6■□□□□ 0.89
CDK7P50613 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK7P50613 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK7P50613 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK7P50613 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK7P50613 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK7P50613 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK7P50613 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDK7P50613 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK7P50613 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK7P50613 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms