Protein–RNA interactions for Protein: P48380

RFX3, Transcription factor RFX3, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3P48380 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RFX3P48380 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
RFX3P48380 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
RFX3P48380 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.57■□□□□ 0.4
RFX3P48380 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RFX3P48380 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.57■□□□□ 0.4
RFX3P48380 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.57■□□□□ 0.4
RFX3P48380 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.57■□□□□ 0.4
RFX3P48380 REXO1L10P-201ENST00000615707 1290 ntBASIC17.57■□□□□ 0.4
RFX3P48380 AC130371.2-201ENST00000619443 611 ntBASIC17.57■□□□□ 0.4
RFX3P48380 REXO1L12P-201ENST00000622156 912 ntBASIC17.57■□□□□ 0.4
RFX3P48380 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
RFX3P48380 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
RFX3P48380 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RFX3P48380 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX3P48380 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
RFX3P48380 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX3P48380 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.56■□□□□ 0.4
RFX3P48380 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 MESTP1-201ENST00000404287 994 ntBASIC17.56■□□□□ 0.4
RFX3P48380 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.56■□□□□ 0.4
RFX3P48380 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.56■□□□□ 0.4
RFX3P48380 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.56■□□□□ 0.4
RFX3P48380 MIR4785-201ENST00000585005 73 ntBASIC17.56■□□□□ 0.4
RFX3P48380 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.56■□□□□ 0.4
RFX3P48380 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 NEFHP1-201ENST00000412845 2629 ntBASIC17.56■□□□□ 0.4
RFX3P48380 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
RFX3P48380 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
RFX3P48380 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RFX3P48380 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFX3P48380 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX3P48380 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RFX3P48380 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX3P48380 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.55■□□□□ 0.4
RFX3P48380 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFX3P48380 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RFX3P48380 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
RFX3P48380 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.55■□□□□ 0.4
RFX3P48380 PRSS44-201ENST00000515154 1146 ntBASIC17.55■□□□□ 0.4
RFX3P48380 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX3P48380 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.55■□□□□ 0.4
RFX3P48380 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX3P48380 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.55■□□□□ 0.4
RFX3P48380 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX3P48380 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.55■□□□□ 0.4
RFX3P48380 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.55■□□□□ 0.4
RFX3P48380 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.55■□□□□ 0.4
RFX3P48380 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
RFX3P48380 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RFX3P48380 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms