Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC008556.1-201ENST00000610908 2040 ntBASIC19.32■□□□□ 0.68
PTPN7P35236 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.32■□□□□ 0.68
PTPN7P35236 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
PTPN7P35236 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.32■□□□□ 0.68
PTPN7P35236 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.32■□□□□ 0.68
PTPN7P35236 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.32■□□□□ 0.68
PTPN7P35236 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.32■□□□□ 0.68
PTPN7P35236 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTPN7P35236 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PTPN7P35236 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPN7P35236 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.32■□□□□ 0.68
PTPN7P35236 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTPN7P35236 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.32■□□□□ 0.68
PTPN7P35236 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
PTPN7P35236 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PTPN7P35236 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PTPN7P35236 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTPN7P35236 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 AL023284.2-201ENST00000405850 579 ntBASIC19.31■□□□□ 0.68
PTPN7P35236 NUDT16P1-203ENST00000513809 620 ntBASIC19.31■□□□□ 0.68
PTPN7P35236 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PTPN7P35236 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN7P35236 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTPN7P35236 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.31■□□□□ 0.68
PTPN7P35236 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.31■□□□□ 0.68
PTPN7P35236 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTPN7P35236 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PTPN7P35236 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN7P35236 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PTPN7P35236 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
PTPN7P35236 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTPN7P35236 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 PRORSD1P-201ENST00000295112 541 ntBASIC19.3■□□□□ 0.68
PTPN7P35236 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 MIR564-202ENST00000385049 94 ntBASIC19.3■□□□□ 0.68
PTPN7P35236 AP000593.1-201ENST00000393668 712 ntBASIC19.3■□□□□ 0.68
PTPN7P35236 KRT18P29-201ENST00000397031 1267 ntBASIC19.3■□□□□ 0.68
PTPN7P35236 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN7P35236 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.3■□□□□ 0.68
PTPN7P35236 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.3■□□□□ 0.68
PTPN7P35236 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.3■□□□□ 0.68
PTPN7P35236 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PTPN7P35236 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTPN7P35236 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTPN7P35236 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.29■□□□□ 0.68
PTPN7P35236 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms