Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HOXC8P31273 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.39■□□□□ 0.85
HOXC8P31273 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC8P31273 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
HOXC8P31273 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HOXC8P31273 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC8P31273 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
HOXC8P31273 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.39■□□□□ 0.85
HOXC8P31273 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.38■□□□□ 0.85
HOXC8P31273 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC8P31273 AL353692.3-201ENST00000407031 1396 ntBASIC20.38■□□□□ 0.85
HOXC8P31273 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.38■□□□□ 0.85
HOXC8P31273 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HOXC8P31273 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC8P31273 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
HOXC8P31273 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC8P31273 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.38■□□□□ 0.85
HOXC8P31273 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.38■□□□□ 0.85
HOXC8P31273 AC074051.2-201ENST00000565115 352 ntBASIC20.38■□□□□ 0.85
HOXC8P31273 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HOXC8P31273 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HOXC8P31273 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HOXC8P31273 AL163051.1-201ENST00000569214 1512 ntBASIC20.37■□□□□ 0.85
HOXC8P31273 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.37■□□□□ 0.85
HOXC8P31273 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.37■□□□□ 0.85
HOXC8P31273 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 AC079781.3-201ENST00000449110 356 ntBASIC20.37■□□□□ 0.85
HOXC8P31273 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC8P31273 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC8P31273 AC106795.1-205ENST00000512851 1056 ntBASIC20.37■□□□□ 0.85
HOXC8P31273 AL160237.2-201ENST00000556165 472 ntBASIC20.37■□□□□ 0.85
HOXC8P31273 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.37■□□□□ 0.85
HOXC8P31273 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.37■□□□□ 0.85
HOXC8P31273 Z69720.1-201ENST00000601483 472 ntBASIC20.37■□□□□ 0.85
HOXC8P31273 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.37■□□□□ 0.85
HOXC8P31273 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.37■□□□□ 0.85
HOXC8P31273 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HOXC8P31273 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 LINC00167-201ENST00000530583 1419 ntBASIC20.36■□□□□ 0.85
HOXC8P31273 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
HOXC8P31273 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.36■□□□□ 0.85
HOXC8P31273 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC8P31273 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.36■□□□□ 0.85
HOXC8P31273 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
HOXC8P31273 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.36■□□□□ 0.85
HOXC8P31273 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
HOXC8P31273 GUSBP12-201ENST00000513727 720 ntBASIC20.36■□□□□ 0.85
HOXC8P31273 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.36■□□□□ 0.85
HOXC8P31273 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.36■□□□□ 0.85
HOXC8P31273 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HOXC8P31273 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
HOXC8P31273 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HOXC8P31273 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.35■□□□□ 0.85
HOXC8P31273 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HOXC8P31273 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.35■□□□□ 0.85
HOXC8P31273 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HOXC8P31273 AC091607.1-201ENST00000490318 1060 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms