Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AL023973.1-201ENST00000624619 620 ntBASIC17.74■□□□□ 0.43
MMP11P24347 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP11P24347 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.74■□□□□ 0.43
MMP11P24347 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP11P24347 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
MMP11P24347 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP11P24347 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
MMP11P24347 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.74■□□□□ 0.43
MMP11P24347 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
MMP11P24347 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
MMP11P24347 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 AC006333.2-201ENST00000607957 2099 ntBASIC17.73■□□□□ 0.43
MMP11P24347 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
MMP11P24347 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
MMP11P24347 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
MMP11P24347 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP11P24347 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP11P24347 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP11P24347 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 AL441883.1-201ENST00000566170 1045 ntBASIC17.73■□□□□ 0.43
MMP11P24347 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
MMP11P24347 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.73■□□□□ 0.43
MMP11P24347 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.73■□□□□ 0.43
MMP11P24347 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP11P24347 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.73■□□□□ 0.43
MMP11P24347 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
MMP11P24347 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.73■□□□□ 0.43
MMP11P24347 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MMP11P24347 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP11P24347 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MMP11P24347 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP11P24347 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP11P24347 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP11P24347 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP11P24347 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP11P24347 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.72■□□□□ 0.43
MMP11P24347 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP11P24347 AL031133.1-201ENST00000406807 723 ntBASIC17.72■□□□□ 0.43
MMP11P24347 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.72■□□□□ 0.43
MMP11P24347 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.72■□□□□ 0.43
MMP11P24347 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.72■□□□□ 0.43
MMP11P24347 AC008622.2-201ENST00000617006 1229 ntBASIC17.72■□□□□ 0.43
MMP11P24347 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MMP11P24347 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
MMP11P24347 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MMP11P24347 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.71■□□□□ 0.43
MMP11P24347 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.71■□□□□ 0.43
MMP11P24347 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 AC009947.2-201ENST00000444014 672 ntBASIC17.71■□□□□ 0.43
MMP11P24347 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.71■□□□□ 0.43
MMP11P24347 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.71■□□□□ 0.43
MMP11P24347 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 MIR4674-201ENST00000582457 87 ntBASIC17.71■□□□□ 0.43
MMP11P24347 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.71■□□□□ 0.43
MMP11P24347 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MMP11P24347 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
MMP11P24347 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.71■□□□□ 0.43
MMP11P24347 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms