Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 TSPY7P-201ENST00000431358 1114 ntBASIC16.52■□□□□ 0.24
MSR1P21757 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 CA15P1-201ENST00000481698 905 ntBASIC16.52■□□□□ 0.24
MSR1P21757 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.52■□□□□ 0.24
MSR1P21757 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.52■□□□□ 0.24
MSR1P21757 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.52■□□□□ 0.24
MSR1P21757 AP005242.2-201ENST00000580065 1175 ntBASIC16.52■□□□□ 0.24
MSR1P21757 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.52■□□□□ 0.24
MSR1P21757 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MSR1P21757 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.52■□□□□ 0.24
MSR1P21757 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSR1P21757 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSR1P21757 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.52■□□□□ 0.23
MSR1P21757 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
MSR1P21757 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.52■□□□□ 0.23
MSR1P21757 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSR1P21757 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSR1P21757 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MSR1P21757 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MSR1P21757 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.51■□□□□ 0.23
MSR1P21757 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.51■□□□□ 0.23
MSR1P21757 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.51■□□□□ 0.23
MSR1P21757 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MSR1P21757 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
MSR1P21757 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MSR1P21757 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.5■□□□□ 0.23
MSR1P21757 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 RBM17P1-201ENST00000453646 1190 ntBASIC16.5■□□□□ 0.23
MSR1P21757 SNORA78-201ENST00000459373 127 ntBASIC16.5■□□□□ 0.23
MSR1P21757 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.5■□□□□ 0.23
MSR1P21757 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.5■□□□□ 0.23
MSR1P21757 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MSR1P21757 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.5■□□□□ 0.23
MSR1P21757 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MSR1P21757 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
MSR1P21757 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MSR1P21757 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MSR1P21757 KRT17P2-201ENST00000300992 1314 ntBASIC16.49■□□□□ 0.23
MSR1P21757 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MSR1P21757 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MSR1P21757 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.49■□□□□ 0.23
MSR1P21757 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms