Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 MIR4674-201ENST00000582457 87 ntBASIC18.85■□□□□ 0.61
HLA-DPA1P20036 AC010653.2-201ENST00000623505 997 ntBASIC18.85■□□□□ 0.61
HLA-DPA1P20036 MYC-208ENST00000641036 567 ntBASIC18.85■□□□□ 0.61
HLA-DPA1P20036 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HLA-DPA1P20036 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 KRT8P9-201ENST00000558927 1449 ntBASIC18.84■□□□□ 0.61
HLA-DPA1P20036 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 AC007663.1-201ENST00000438948 1240 ntBASIC18.84■□□□□ 0.61
HLA-DPA1P20036 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 AC128688.1-201ENST00000487626 519 ntBASIC18.84■□□□□ 0.61
HLA-DPA1P20036 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 MIR3180-5-201ENST00000583743 153 ntBASIC18.84■□□□□ 0.61
HLA-DPA1P20036 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DPA1P20036 CYP2D8P-201ENST00000433633 1490 ntBASIC18.84■□□□□ 0.61
HLA-DPA1P20036 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPA1P20036 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.83■□□□□ 0.61
HLA-DPA1P20036 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPA1P20036 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPA1P20036 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 MIR564-202ENST00000385049 94 ntBASIC18.83■□□□□ 0.6
HLA-DPA1P20036 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 AC010947.1-201ENST00000623454 693 ntBASIC18.83■□□□□ 0.6
HLA-DPA1P20036 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 KRT8P45-201ENST00000414328 1447 ntBASIC18.83■□□□□ 0.6
HLA-DPA1P20036 AC112777.1-201ENST00000540175 1423 ntBASIC18.83■□□□□ 0.6
HLA-DPA1P20036 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPA1P20036 WIZP1-201ENST00000531444 2299 ntBASIC18.83■□□□□ 0.6
HLA-DPA1P20036 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.82■□□□□ 0.6
HLA-DPA1P20036 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPA1P20036 RNF165-205ENST00000588679 2904 ntBASIC18.82■□□□□ 0.6
HLA-DPA1P20036 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms