Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.88■□□□□ 0.13
HIST1H1DP16402 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HIST1H1DP16402 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 AC112777.1-201ENST00000540175 1423 ntBASIC15.87■□□□□ 0.13
HIST1H1DP16402 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 NBPF21P-201ENST00000425093 1451 ntBASIC15.87■□□□□ 0.13
HIST1H1DP16402 KRT8P32-201ENST00000512863 1461 ntBASIC15.87■□□□□ 0.13
HIST1H1DP16402 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.87■□□□□ 0.13
HIST1H1DP16402 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HIST1H1DP16402 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.87■□□□□ 0.13
HIST1H1DP16402 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 NCF1B-203ENST00000435988 1254 ntBASIC15.86■□□□□ 0.13
HIST1H1DP16402 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 AC004264.1-201ENST00000608354 794 ntBASIC15.86■□□□□ 0.13
HIST1H1DP16402 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HIST1H1DP16402 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.86■□□□□ 0.13
HIST1H1DP16402 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 GNAS-203ENST00000306120 1878 ntBASIC15.85■□□□□ 0.13
HIST1H1DP16402 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 PPP1R14BP3-201ENST00000509033 445 ntBASIC15.85■□□□□ 0.13
HIST1H1DP16402 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HIST1H1DP16402 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
HIST1H1DP16402 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms