Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFRAP16234 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFRAP16234 MCCD1P1-208ENST00000445732 328 ntBASIC19.6■□□□□ 0.73
PDGFRAP16234 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 AP003041.3-201ENST00000527151 707 ntBASIC19.6■□□□□ 0.73
PDGFRAP16234 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.6■□□□□ 0.73
PDGFRAP16234 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFRAP16234 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.6■□□□□ 0.73
PDGFRAP16234 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFRAP16234 AC116562.4-202ENST00000641738 218 ntBASIC19.6■□□□□ 0.73
PDGFRAP16234 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFRAP16234 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PDGFRAP16234 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.6■□□□□ 0.73
PDGFRAP16234 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFRAP16234 AC092338.2-201ENST00000568827 1415 ntBASIC19.59■□□□□ 0.73
PDGFRAP16234 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 KRT18P22-201ENST00000402024 1347 ntBASIC19.59■□□□□ 0.73
PDGFRAP16234 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
PDGFRAP16234 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.59■□□□□ 0.73
PDGFRAP16234 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.59■□□□□ 0.73
PDGFRAP16234 TSPY14P-201ENST00000303979 915 ntBASIC19.59■□□□□ 0.73
PDGFRAP16234 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFRAP16234 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
PDGFRAP16234 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.59■□□□□ 0.73
PDGFRAP16234 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFRAP16234 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.59■□□□□ 0.73
PDGFRAP16234 MIR4674-201ENST00000582457 87 ntBASIC19.59■□□□□ 0.73
PDGFRAP16234 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDGFRAP16234 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PDGFRAP16234 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.59■□□□□ 0.73
PDGFRAP16234 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PDGFRAP16234 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFRAP16234 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
PDGFRAP16234 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFRAP16234 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.58■□□□□ 0.73
PDGFRAP16234 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFRAP16234 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFRAP16234 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFRAP16234 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.58■□□□□ 0.73
PDGFRAP16234 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFRAP16234 INGX-201ENST00000359239 846 ntBASIC19.58■□□□□ 0.72
PDGFRAP16234 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PDGFRAP16234 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 AC007663.1-201ENST00000438948 1240 ntBASIC19.58■□□□□ 0.72
PDGFRAP16234 KRT18P21-201ENST00000515767 1272 ntBASIC19.58■□□□□ 0.72
PDGFRAP16234 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.58■□□□□ 0.72
PDGFRAP16234 EGLN1P1-201ENST00000531623 762 ntBASIC19.58■□□□□ 0.72
PDGFRAP16234 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.58■□□□□ 0.72
PDGFRAP16234 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PDGFRAP16234 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PDGFRAP16234 AL499627.1-201ENST00000569373 2188 ntBASIC19.58■□□□□ 0.72
PDGFRAP16234 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PDGFRAP16234 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFRAP16234 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
PDGFRAP16234 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.58■□□□□ 0.72
PDGFRAP16234 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFRAP16234 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PDGFRAP16234 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFRAP16234 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PDGFRAP16234 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 ECEL1P2-202ENST00000465689 757 ntBASIC19.57■□□□□ 0.72
PDGFRAP16234 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDGFRAP16234 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFRAP16234 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFRAP16234 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDGFRAP16234 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDGFRAP16234 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFRAP16234 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFRAP16234 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.56■□□□□ 0.72
PDGFRAP16234 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFRAP16234 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PDGFRAP16234 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDGFRAP16234 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PDGFRAP16234 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms