Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.86■□□□□ 0.61
SRPRAP08240 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.86■□□□□ 0.61
SRPRAP08240 AC009065.1-201ENST00000564055 1225 ntBASIC18.86■□□□□ 0.61
SRPRAP08240 AC069148.1-201ENST00000608741 768 ntBASIC18.86■□□□□ 0.61
SRPRAP08240 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SRPRAP08240 AL391807.1-203ENST00000604392 2365 ntBASIC18.86■□□□□ 0.61
SRPRAP08240 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SRPRAP08240 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SRPRAP08240 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.86■□□□□ 0.61
SRPRAP08240 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SRPRAP08240 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 MTMR9LP-203ENST00000426597 1545 ntBASIC18.85■□□□□ 0.61
SRPRAP08240 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SRPRAP08240 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.85■□□□□ 0.61
SRPRAP08240 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.85■□□□□ 0.61
SRPRAP08240 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.85■□□□□ 0.61
SRPRAP08240 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.85■□□□□ 0.61
SRPRAP08240 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.85■□□□□ 0.61
SRPRAP08240 KRT18P41-201ENST00000518924 1277 ntBASIC18.85■□□□□ 0.61
SRPRAP08240 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.85■□□□□ 0.61
SRPRAP08240 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SRPRAP08240 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.85■□□□□ 0.61
SRPRAP08240 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.85■□□□□ 0.61
SRPRAP08240 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SRPRAP08240 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.84■□□□□ 0.61
SRPRAP08240 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SRPRAP08240 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.84■□□□□ 0.61
SRPRAP08240 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SRPRAP08240 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.84■□□□□ 0.61
SRPRAP08240 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SRPRAP08240 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SRPRAP08240 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.84■□□□□ 0.61
SRPRAP08240 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.84■□□□□ 0.61
SRPRAP08240 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.83■□□□□ 0.61
SRPRAP08240 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SRPRAP08240 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SRPRAP08240 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.83■□□□□ 0.61
SRPRAP08240 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 MIR662-201ENST00000384847 95 ntBASIC18.83■□□□□ 0.6
SRPRAP08240 AP000593.1-201ENST00000393668 712 ntBASIC18.83■□□□□ 0.6
SRPRAP08240 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.83■□□□□ 0.6
SRPRAP08240 PVRIG2P-201ENST00000435460 978 ntBASIC18.83■□□□□ 0.6
SRPRAP08240 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.83■□□□□ 0.6
SRPRAP08240 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.83■□□□□ 0.6
SRPRAP08240 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.83■□□□□ 0.6
SRPRAP08240 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.83■□□□□ 0.6
SRPRAP08240 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
SRPRAP08240 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.83■□□□□ 0.6
SRPRAP08240 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SRPRAP08240 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SRPRAP08240 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.83■□□□□ 0.6
SRPRAP08240 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SRPRAP08240 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SRPRAP08240 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
SRPRAP08240 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms