Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
OPN1SWP03999 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.48■□□□□ 0.39
OPN1SWP03999 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.48■□□□□ 0.39
OPN1SWP03999 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.48■□□□□ 0.39
OPN1SWP03999 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
OPN1SWP03999 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.48■□□□□ 0.39
OPN1SWP03999 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.48■□□□□ 0.39
OPN1SWP03999 FZD10-202ENST00000539839 3282 ntBASIC17.48■□□□□ 0.39
OPN1SWP03999 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.48■□□□□ 0.39
OPN1SWP03999 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 POU5F1P3-201ENST00000428824 1078 ntBASIC17.48■□□□□ 0.39
OPN1SWP03999 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
OPN1SWP03999 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.48■□□□□ 0.39
OPN1SWP03999 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.48■□□□□ 0.39
OPN1SWP03999 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
OPN1SWP03999 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.48■□□□□ 0.39
OPN1SWP03999 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.48■□□□□ 0.39
OPN1SWP03999 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
OPN1SWP03999 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
OPN1SWP03999 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
OPN1SWP03999 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.47■□□□□ 0.39
OPN1SWP03999 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
OPN1SWP03999 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
OPN1SWP03999 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
OPN1SWP03999 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.47■□□□□ 0.39
OPN1SWP03999 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.47■□□□□ 0.39
OPN1SWP03999 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.47■□□□□ 0.39
OPN1SWP03999 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.47■□□□□ 0.39
OPN1SWP03999 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.47■□□□□ 0.39
OPN1SWP03999 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
OPN1SWP03999 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.47■□□□□ 0.39
OPN1SWP03999 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.47■□□□□ 0.39
OPN1SWP03999 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 AC068587.9-201ENST00000641814 219 ntBASIC17.47■□□□□ 0.39
OPN1SWP03999 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.47■□□□□ 0.39
OPN1SWP03999 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
OPN1SWP03999 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
OPN1SWP03999 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.47■□□□□ 0.39
OPN1SWP03999 AC067852.2-201ENST00000590513 2313 ntBASIC17.47■□□□□ 0.39
OPN1SWP03999 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.47■□□□□ 0.39
OPN1SWP03999 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
OPN1SWP03999 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.46■□□□□ 0.39
OPN1SWP03999 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.46■□□□□ 0.39
OPN1SWP03999 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
OPN1SWP03999 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.46■□□□□ 0.39
OPN1SWP03999 KRT16P5-201ENST00000455284 522 ntBASIC17.46■□□□□ 0.39
OPN1SWP03999 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.46■□□□□ 0.39
OPN1SWP03999 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.46■□□□□ 0.39
OPN1SWP03999 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
OPN1SWP03999 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
OPN1SWP03999 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
OPN1SWP03999 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPN1SWP03999 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
OPN1SWP03999 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPN1SWP03999 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPN1SWP03999 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.45■□□□□ 0.38
OPN1SWP03999 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPN1SWP03999 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPN1SWP03999 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
OPN1SWP03999 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
OPN1SWP03999 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPN1SWP03999 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
OPN1SWP03999 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms