Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.34■□□□□ 0.53
CPNE6O95741 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CPNE6O95741 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE6O95741 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE6O95741 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE6O95741 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.33■□□□□ 0.53
CPNE6O95741 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE6O95741 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE6O95741 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.53
CPNE6O95741 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CPNE6O95741 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE6O95741 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPNE6O95741 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
CPNE6O95741 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPNE6O95741 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
CPNE6O95741 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CPNE6O95741 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 TSPY21P-201ENST00000433481 731 ntBASIC18.33■□□□□ 0.52
CPNE6O95741 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 AC009947.2-201ENST00000444014 672 ntBASIC18.33■□□□□ 0.52
CPNE6O95741 AL671277.2-201ENST00000458060 996 ntBASIC18.33■□□□□ 0.52
CPNE6O95741 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.33■□□□□ 0.52
CPNE6O95741 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CPNE6O95741 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE6O95741 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.33■□□□□ 0.52
CPNE6O95741 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.33■□□□□ 0.52
CPNE6O95741 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE6O95741 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.33■□□□□ 0.52
CPNE6O95741 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPNE6O95741 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE6O95741 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 AC020916.1-201ENST00000587762 1774 ntBASIC18.32■□□□□ 0.52
CPNE6O95741 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE6O95741 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.32■□□□□ 0.52
CPNE6O95741 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE6O95741 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE6O95741 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE6O95741 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE6O95741 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPNE6O95741 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.32■□□□□ 0.52
CPNE6O95741 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.32■□□□□ 0.52
CPNE6O95741 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPNE6O95741 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE6O95741 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.31■□□□□ 0.52
CPNE6O95741 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CPNE6O95741 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
CPNE6O95741 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 PCED1CP-201ENST00000419887 785 ntBASIC18.31■□□□□ 0.52
CPNE6O95741 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE6O95741 FAM86EP-206ENST00000510506 987 ntBASIC18.31■□□□□ 0.52
CPNE6O95741 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE6O95741 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPNE6O95741 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.31■□□□□ 0.52
CPNE6O95741 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPNE6O95741 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CPNE6O95741 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.3■□□□□ 0.52
CPNE6O95741 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
CPNE6O95741 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CPNE6O95741 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPNE6O95741 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms