Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC20.68■□□□□ 0.9
CLSTN1O94985 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.68■□□□□ 0.9
CLSTN1O94985 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLSTN1O94985 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.68■□□□□ 0.9
CLSTN1O94985 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 AC005082.1-201ENST00000413042 2259 ntBASIC20.68■□□□□ 0.9
CLSTN1O94985 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.68■□□□□ 0.9
CLSTN1O94985 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.68■□□□□ 0.9
CLSTN1O94985 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 AC004951.3-201ENST00000418645 1148 ntBASIC20.68■□□□□ 0.9
CLSTN1O94985 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.68■□□□□ 0.9
CLSTN1O94985 AP003071.4-201ENST00000562276 1284 ntBASIC20.68■□□□□ 0.9
CLSTN1O94985 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CLSTN1O94985 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 MIR6786-201ENST00000616843 113 ntBASIC20.68■□□□□ 0.9
CLSTN1O94985 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.68■□□□□ 0.9
CLSTN1O94985 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.68■□□□□ 0.9
CLSTN1O94985 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.68■□□□□ 0.9
CLSTN1O94985 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 RCC2P6-201ENST00000526625 1557 ntBASIC20.68■□□□□ 0.9
CLSTN1O94985 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLSTN1O94985 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 TEX21P-204ENST00000641479 1693 ntBASIC20.67■□□□□ 0.9
CLSTN1O94985 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CLSTN1O94985 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLSTN1O94985 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 NUDT16P1-203ENST00000513809 620 ntBASIC20.67■□□□□ 0.9
CLSTN1O94985 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.67■□□□□ 0.9
CLSTN1O94985 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLSTN1O94985 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CLSTN1O94985 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.67■□□□□ 0.9
CLSTN1O94985 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLSTN1O94985 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.66■□□□□ 0.9
CLSTN1O94985 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CLSTN1O94985 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.66■□□□□ 0.9
CLSTN1O94985 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLSTN1O94985 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.66■□□□□ 0.9
CLSTN1O94985 FAM207BP-201ENST00000447172 505 ntBASIC20.66■□□□□ 0.9
CLSTN1O94985 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.66■□□□□ 0.9
CLSTN1O94985 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.66■□□□□ 0.9
CLSTN1O94985 AC026271.3-201ENST00000571884 352 ntBASIC20.66■□□□□ 0.9
CLSTN1O94985 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.66■□□□□ 0.9
CLSTN1O94985 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.66■□□□□ 0.9
CLSTN1O94985 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.66■□□□□ 0.9
CLSTN1O94985 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.66■□□□□ 0.9
CLSTN1O94985 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC20.66■□□□□ 0.9
CLSTN1O94985 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLSTN1O94985 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLSTN1O94985 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLSTN1O94985 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.65■□□□□ 0.9
CLSTN1O94985 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLSTN1O94985 KRT17P2-201ENST00000300992 1314 ntBASIC20.65■□□□□ 0.9
CLSTN1O94985 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLSTN1O94985 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLSTN1O94985 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.65■□□□□ 0.9
CLSTN1O94985 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.65■□□□□ 0.9
CLSTN1O94985 Z85996.1-201ENST00000494644 937 ntBASIC20.65■□□□□ 0.9
CLSTN1O94985 SLC25A1P4-201ENST00000567977 778 ntBASIC20.65■□□□□ 0.9
CLSTN1O94985 MIR4497-201ENST00000583208 89 ntBASIC20.65■□□□□ 0.9
CLSTN1O94985 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.65■□□□□ 0.9
CLSTN1O94985 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CLSTN1O94985 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLSTN1O94985 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms