Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC21.72■■□□□ 1.07
PRPF40AO75400 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PRPF40AO75400 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF40AO75400 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.72■■□□□ 1.07
PRPF40AO75400 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PRPF40AO75400 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PRPF40AO75400 TSPY23P-201ENST00000440136 739 ntBASIC21.72■■□□□ 1.07
PRPF40AO75400 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.72■■□□□ 1.07
PRPF40AO75400 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PRPF40AO75400 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF40AO75400 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF40AO75400 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF40AO75400 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF40AO75400 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF40AO75400 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF40AO75400 PNMA6B-201ENST00000538162 1200 ntBASIC21.71■■□□□ 1.07
PRPF40AO75400 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.71■■□□□ 1.07
PRPF40AO75400 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.71■■□□□ 1.07
PRPF40AO75400 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.71■■□□□ 1.07
PRPF40AO75400 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PRPF40AO75400 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.71■■□□□ 1.07
PRPF40AO75400 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRPF40AO75400 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
PRPF40AO75400 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PRPF40AO75400 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC21.7■■□□□ 1.07
PRPF40AO75400 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PRPF40AO75400 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.7■■□□□ 1.07
PRPF40AO75400 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.7■■□□□ 1.06
PRPF40AO75400 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.7■■□□□ 1.06
PRPF40AO75400 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.7■■□□□ 1.06
PRPF40AO75400 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.7■■□□□ 1.06
PRPF40AO75400 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF40AO75400 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
PRPF40AO75400 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.7■■□□□ 1.06
PRPF40AO75400 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.7■■□□□ 1.06
PRPF40AO75400 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRPF40AO75400 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF40AO75400 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
PRPF40AO75400 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF40AO75400 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.69■■□□□ 1.06
PRPF40AO75400 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PRPF40AO75400 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
PRPF40AO75400 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.69■■□□□ 1.06
PRPF40AO75400 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
PRPF40AO75400 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.69■■□□□ 1.06
PRPF40AO75400 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF40AO75400 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
PRPF40AO75400 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC21.69■■□□□ 1.06
PRPF40AO75400 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
PRPF40AO75400 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC21.69■■□□□ 1.06
PRPF40AO75400 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRPF40AO75400 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.69■■□□□ 1.06
PRPF40AO75400 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms