Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF11O60813 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF11O60813 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.95■□□□□ 0.62
PRAMEF11O60813 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF11O60813 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF11O60813 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF11O60813 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PRAMEF11O60813 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 KRT8P50-201ENST00000562022 1438 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 AP000593.1-201ENST00000393668 712 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 TMPOP1-202ENST00000424642 1267 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 AC117947.1-201ENST00000427448 529 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 FAM210CP-201ENST00000445714 574 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 AC024243.1-201ENST00000609234 778 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 MYC-208ENST00000641036 567 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 AL031432.5-201ENST00000641059 760 ntBASIC18.94■□□□□ 0.62
PRAMEF11O60813 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PRAMEF11O60813 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PRAMEF11O60813 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 SEC1P-202ENST00000473944 940 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 YBX1P2-201ENST00000489612 999 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 AC104390.1-201ENST00000555663 520 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 AC140113.3-201ENST00000605663 199 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 AC011558.1-201ENST00000623459 338 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.93■□□□□ 0.62
PRAMEF11O60813 AL138781.2-201ENST00000617896 1843 ntBASIC18.93■□□□□ 0.62
PRAMEF11O60813 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PRAMEF11O60813 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 AC104076.2-201ENST00000448912 469 ntBASIC18.92■□□□□ 0.62
PRAMEF11O60813 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 GCSHP2-201ENST00000560971 527 ntBASIC18.92■□□□□ 0.62
PRAMEF11O60813 AL441883.1-201ENST00000566170 1045 ntBASIC18.92■□□□□ 0.62
PRAMEF11O60813 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PRAMEF11O60813 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PRAMEF11O60813 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEF11O60813 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.91■□□□□ 0.62
PRAMEF11O60813 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
PRAMEF11O60813 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms