Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 RNF152P1-201ENST00000397754 604 ntBASIC17.55■□□□□ 0.4
PRAMEF2O60811 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 COX11P1-201ENST00000489116 835 ntBASIC17.55■□□□□ 0.4
PRAMEF2O60811 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.55■□□□□ 0.4
PRAMEF2O60811 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 AL512353.2-201ENST00000448759 1962 ntBASIC17.55■□□□□ 0.4
PRAMEF2O60811 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRAMEF2O60811 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 AC141257.4-201ENST00000634557 245 ntBASIC17.54■□□□□ 0.4
PRAMEF2O60811 AC136944.6-201ENST00000634818 245 ntBASIC17.54■□□□□ 0.4
PRAMEF2O60811 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
PRAMEF2O60811 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRAMEF2O60811 TNXA-203ENST00000507684 2038 ntBASIC17.54■□□□□ 0.4
PRAMEF2O60811 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 YBX1P2-201ENST00000489612 999 ntBASIC17.53■□□□□ 0.4
PRAMEF2O60811 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRAMEF2O60811 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.53■□□□□ 0.4
PRAMEF2O60811 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 KRT8P32-201ENST00000512863 1461 ntBASIC17.52■□□□□ 0.4
PRAMEF2O60811 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRAMEF2O60811 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.52■□□□□ 0.4
PRAMEF2O60811 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms