Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.25■□□□□ 0.67
TSPAN3O60637 KRT18P23-201ENST00000435622 1283 ntBASIC19.25■□□□□ 0.67
TSPAN3O60637 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN3O60637 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.25■□□□□ 0.67
TSPAN3O60637 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.25■□□□□ 0.67
TSPAN3O60637 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TSPAN3O60637 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.25■□□□□ 0.67
TSPAN3O60637 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.25■□□□□ 0.67
TSPAN3O60637 AC068587.9-201ENST00000641814 219 ntBASIC19.25■□□□□ 0.67
TSPAN3O60637 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TSPAN3O60637 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TSPAN3O60637 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
TSPAN3O60637 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.24■□□□□ 0.67
TSPAN3O60637 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TSPAN3O60637 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 SEC1P-202ENST00000473944 940 ntBASIC19.24■□□□□ 0.67
TSPAN3O60637 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.24■□□□□ 0.67
TSPAN3O60637 AL358472.4-201ENST00000633140 710 ntBASIC19.24■□□□□ 0.67
TSPAN3O60637 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.24■□□□□ 0.67
TSPAN3O60637 AC020763.4-201ENST00000623414 4170 ntBASIC19.24■□□□□ 0.67
TSPAN3O60637 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
TSPAN3O60637 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.24■□□□□ 0.67
TSPAN3O60637 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.24■□□□□ 0.67
TSPAN3O60637 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TSPAN3O60637 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.24■□□□□ 0.67
TSPAN3O60637 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.24■□□□□ 0.67
TSPAN3O60637 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TSPAN3O60637 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.23■□□□□ 0.67
TSPAN3O60637 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
TSPAN3O60637 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 STARP1-201ENST00000397973 869 ntBASIC19.23■□□□□ 0.67
TSPAN3O60637 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.23■□□□□ 0.67
TSPAN3O60637 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.23■□□□□ 0.67
TSPAN3O60637 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.23■□□□□ 0.67
TSPAN3O60637 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.23■□□□□ 0.67
TSPAN3O60637 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.23■□□□□ 0.67
TSPAN3O60637 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TSPAN3O60637 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.23■□□□□ 0.67
TSPAN3O60637 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.23■□□□□ 0.67
TSPAN3O60637 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TSPAN3O60637 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.23■□□□□ 0.67
TSPAN3O60637 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TSPAN3O60637 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TSPAN3O60637 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TSPAN3O60637 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TSPAN3O60637 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TSPAN3O60637 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.22■□□□□ 0.67
TSPAN3O60637 RASA4DP-201ENST00000460726 1199 ntBASIC19.22■□□□□ 0.67
TSPAN3O60637 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.22■□□□□ 0.67
TSPAN3O60637 AC092597.1-201ENST00000487352 616 ntBASIC19.22■□□□□ 0.67
TSPAN3O60637 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.22■□□□□ 0.67
TSPAN3O60637 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
TSPAN3O60637 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TSPAN3O60637 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TSPAN3O60637 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TSPAN3O60637 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
TSPAN3O60637 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
TSPAN3O60637 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TSPAN3O60637 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.21■□□□□ 0.67
TSPAN3O60637 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms