Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.85■□□□□ 0.45
LCMT2O60294 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
LCMT2O60294 AC113347.1-201ENST00000413321 391 ntBASIC17.85■□□□□ 0.45
LCMT2O60294 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
LCMT2O60294 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 AL020996.1-203ENST00000536896 2307 ntBASIC17.85■□□□□ 0.45
LCMT2O60294 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 AC073508.3-201ENST00000619697 1419 ntBASIC17.85■□□□□ 0.45
LCMT2O60294 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.85■□□□□ 0.45
LCMT2O60294 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LCMT2O60294 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.85■□□□□ 0.45
LCMT2O60294 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 AL138781.2-201ENST00000617896 1843 ntBASIC17.84■□□□□ 0.45
LCMT2O60294 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.84■□□□□ 0.45
LCMT2O60294 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 TERF1P1-201ENST00000311003 1181 ntBASIC17.84■□□□□ 0.45
LCMT2O60294 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
LCMT2O60294 AL137013.1-201ENST00000432946 1228 ntBASIC17.84■□□□□ 0.45
LCMT2O60294 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.84■□□□□ 0.45
LCMT2O60294 AC009947.2-201ENST00000444014 672 ntBASIC17.84■□□□□ 0.45
LCMT2O60294 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.84■□□□□ 0.45
LCMT2O60294 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.84■□□□□ 0.45
LCMT2O60294 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.84■□□□□ 0.45
LCMT2O60294 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
LCMT2O60294 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.84■□□□□ 0.45
LCMT2O60294 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.84■□□□□ 0.45
LCMT2O60294 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.84■□□□□ 0.45
LCMT2O60294 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
LCMT2O60294 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.84■□□□□ 0.45
LCMT2O60294 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LCMT2O60294 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.83■□□□□ 0.45
LCMT2O60294 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LCMT2O60294 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LCMT2O60294 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LCMT2O60294 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.83■□□□□ 0.44
LCMT2O60294 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.83■□□□□ 0.44
LCMT2O60294 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 LIN28AP1-201ENST00000429574 405 ntBASIC17.83■□□□□ 0.44
LCMT2O60294 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 AL512604.3-201ENST00000569583 964 ntBASIC17.83■□□□□ 0.44
LCMT2O60294 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
LCMT2O60294 AC141257.4-201ENST00000634557 245 ntBASIC17.83■□□□□ 0.44
LCMT2O60294 AC136944.6-201ENST00000634818 245 ntBASIC17.83■□□□□ 0.44
LCMT2O60294 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.83■□□□□ 0.44
LCMT2O60294 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LCMT2O60294 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.83■□□□□ 0.44
LCMT2O60294 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
LCMT2O60294 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LCMT2O60294 AC034236.2-201ENST00000606662 1610 ntBASIC17.83■□□□□ 0.44
LCMT2O60294 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms