Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ATP2A1O14983 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.39■■□□□ 1.01
ATP2A1O14983 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.39■■□□□ 1.01
ATP2A1O14983 RNF126P1-202ENST00000569893 925 ntBASIC21.39■■□□□ 1.01
ATP2A1O14983 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP2A1O14983 AC012313.10-201ENST00000623509 926 ntBASIC21.39■■□□□ 1.01
ATP2A1O14983 AL158211.5-201ENST00000623583 2518 ntBASIC21.39■■□□□ 1.01
ATP2A1O14983 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
ATP2A1O14983 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP2A1O14983 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
ATP2A1O14983 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP2A1O14983 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.39■■□□□ 1.01
ATP2A1O14983 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATP2A1O14983 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
ATP2A1O14983 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.38■■□□□ 1.01
ATP2A1O14983 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
ATP2A1O14983 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
ATP2A1O14983 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.38■■□□□ 1.01
ATP2A1O14983 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 TSPY22P-201ENST00000427496 604 ntBASIC21.38■■□□□ 1.01
ATP2A1O14983 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.38■■□□□ 1.01
ATP2A1O14983 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.38■■□□□ 1.01
ATP2A1O14983 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
ATP2A1O14983 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.38■■□□□ 1.01
ATP2A1O14983 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.38■■□□□ 1.01
ATP2A1O14983 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATP2A1O14983 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.37■■□□□ 1.01
ATP2A1O14983 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC21.37■■□□□ 1.01
ATP2A1O14983 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP2A1O14983 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 SKP2-204ENST00000508514 821 ntTSL 3 BASIC21.37■■□□□ 1.01
ATP2A1O14983 MIR3652-201ENST00000579335 131 ntBASIC21.37■■□□□ 1.01
ATP2A1O14983 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ATP2A1O14983 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.37■■□□□ 1.01
ATP2A1O14983 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
ATP2A1O14983 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
ATP2A1O14983 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
ATP2A1O14983 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP2A1O14983 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP2A1O14983 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
ATP2A1O14983 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
ATP2A1O14983 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.36■■□□□ 1.01
ATP2A1O14983 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP2A1O14983 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP2A1O14983 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
ATP2A1O14983 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP2A1O14983 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.36■■□□□ 1.01
ATP2A1O14983 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.36■■□□□ 1.01
ATP2A1O14983 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 AP002414.4-201ENST00000589764 1148 ntBASIC21.36■■□□□ 1.01
ATP2A1O14983 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
ATP2A1O14983 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 AIRN-201ENST00000601203 4374 ntBASIC21.36■■□□□ 1.01
ATP2A1O14983 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
ATP2A1O14983 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP2A1O14983 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
ATP2A1O14983 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
ATP2A1O14983 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
ATP2A1O14983 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.35■■□□□ 1.01
ATP2A1O14983 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC21.35■■□□□ 1.01
ATP2A1O14983 TPM4P1-201ENST00000436100 807 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms